Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col20a1Q923P0 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.22■□□□□ 0.99
Col20a1Q923P0 Gm3375-201ENSMUST00000203929 796 ntBASIC21.22■□□□□ 0.99
Col20a1Q923P0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.22■□□□□ 0.99
Col20a1Q923P0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col20a1Q923P0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.21■□□□□ 0.99
Col20a1Q923P0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Col20a1Q923P0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col20a1Q923P0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col20a1Q923P0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col20a1Q923P0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col20a1Q923P0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col20a1Q923P0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.21■□□□□ 0.99
Col20a1Q923P0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Col20a1Q923P0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col20a1Q923P0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.2■□□□□ 0.99
Col20a1Q923P0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col20a1Q923P0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col20a1Q923P0 Gm10418-201ENSMUST00000100943 576 ntBASIC21.2■□□□□ 0.98
Col20a1Q923P0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col20a1Q923P0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col20a1Q923P0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col20a1Q923P0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col20a1Q923P0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col20a1Q923P0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col20a1Q923P0 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.19■□□□□ 0.98
Col20a1Q923P0 Gm30025-201ENSMUST00000218555 728 ntBASIC21.19■□□□□ 0.98
Col20a1Q923P0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col20a1Q923P0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col20a1Q923P0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col20a1Q923P0 Gm43799-201ENSMUST00000201845 579 ntBASIC21.18■□□□□ 0.98
Col20a1Q923P0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.18■□□□□ 0.98
Col20a1Q923P0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.18■□□□□ 0.98
Col20a1Q923P0 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.18■□□□□ 0.98
Col20a1Q923P0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col20a1Q923P0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Col20a1Q923P0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col20a1Q923P0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col20a1Q923P0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col20a1Q923P0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Gm10517-202ENSMUST00000192970 758 ntBASIC21.16■□□□□ 0.98
Col20a1Q923P0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.16■□□□□ 0.98
Col20a1Q923P0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Col20a1Q923P0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col20a1Q923P0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col20a1Q923P0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col20a1Q923P0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Col20a1Q923P0 Gm6433-201ENSMUST00000118634 875 ntBASIC21.15■□□□□ 0.98
Col20a1Q923P0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Col20a1Q923P0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.15■□□□□ 0.98
Col20a1Q923P0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col20a1Q923P0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Col20a1Q923P0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col20a1Q923P0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.14■□□□□ 0.97
Col20a1Q923P0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col20a1Q923P0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col20a1Q923P0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms