Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdha2Q91Y17 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdha2Q91Y17 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Gm42545-201ENSMUST00000202755 922 ntBASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha2Q91Y17 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Gm15378-201ENSMUST00000121894 207 ntBASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha2Q91Y17 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Idnk-204ENSMUST00000226010 1898 ntBASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Gm37292-201ENSMUST00000192062 758 ntBASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha2Q91Y17 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha2Q91Y17 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha2Q91Y17 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Gm43183-201ENSMUST00000200632 547 ntBASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha2Q91Y17 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms