Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 Gm5643-201ENSMUST00000117081 966 ntBASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb22Q91XZ8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb22Q91XZ8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb22Q91XZ8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Gm27011-201ENSMUST00000182352 972 ntBASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb22Q91XZ8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb22Q91XZ8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb22Q91XZ8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb22Q91XZ8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Pcdhb22Q91XZ8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb22Q91XZ8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb22Q91XZ8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb22Q91XZ8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb22Q91XZ8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Pcdhb22Q91XZ8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb22Q91XZ8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb22Q91XZ8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhb22Q91XZ8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhb22Q91XZ8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb22Q91XZ8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdhb22Q91XZ8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb22Q91XZ8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb22Q91XZ8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb22Q91XZ8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdhb22Q91XZ8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.88■□□□□ 0.93
Pcdhb22Q91XZ8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.88■□□□□ 0.93
Pcdhb22Q91XZ8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms