Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb5Q91XZ5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb5Q91XZ5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb5Q91XZ5 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.17■□□□□ 0.98
Pcdhb5Q91XZ5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb5Q91XZ5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb5Q91XZ5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb5Q91XZ5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb5Q91XZ5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb5Q91XZ5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb5Q91XZ5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb5Q91XZ5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdhb5Q91XZ5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 Gm27463-201ENSMUST00000183569 57 ntBASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdhb5Q91XZ5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb5Q91XZ5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb5Q91XZ5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb5Q91XZ5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Gm38027-201ENSMUST00000192315 235 ntBASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Gm18959-201ENSMUST00000208954 655 ntBASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb5Q91XZ5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb5Q91XZ5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Gm6659-201ENSMUST00000174752 547 ntBASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Gm4974-201ENSMUST00000209974 875 ntBASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb5Q91XZ5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdhb5Q91XZ5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb5Q91XZ5 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.1■□□□□ 0.97
Pcdhb5Q91XZ5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.1■□□□□ 0.97
Pcdhb5Q91XZ5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdhb5Q91XZ5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb5Q91XZ5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.1■□□□□ 0.97
Pcdhb5Q91XZ5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb5Q91XZ5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb5Q91XZ5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb5Q91XZ5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms