Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Pcdhb6Q91XZ4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb6Q91XZ4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdhb6Q91XZ4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Dio3-201ENSMUST00000097228 1449 ntBASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb6Q91XZ4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb6Q91XZ4 Idnk-204ENSMUST00000226010 1898 ntBASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Gm2559-201ENSMUST00000201323 363 ntBASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms