Protein–RNA interactions for Protein: Q91XY7

Pcdhga12, Protocadherin gamma A12, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga12Q91XY7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga12Q91XY7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhga12Q91XY7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga12Q91XY7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga12Q91XY7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga12Q91XY7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga12Q91XY7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga12Q91XY7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga12Q91XY7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga12Q91XY7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga12Q91XY7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga12Q91XY7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga12Q91XY7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhga12Q91XY7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.09■□□□□ 0.33
Pcdhga12Q91XY7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga12Q91XY7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhga12Q91XY7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhga12Q91XY7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga12Q91XY7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga12Q91XY7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga12Q91XY7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga12Q91XY7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga12Q91XY7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhga12Q91XY7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga12Q91XY7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga12Q91XY7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhga12Q91XY7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga12Q91XY7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga12Q91XY7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga12Q91XY7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhga12Q91XY7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga12Q91XY7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga12Q91XY7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhga12Q91XY7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga12Q91XY7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga12Q91XY7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Grk6-206ENSMUST00000224995 2971 ntBASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Mtag2-201ENSMUST00000058665 714 ntBASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhga12Q91XY7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Gm38285-201ENSMUST00000192928 922 ntBASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga12Q91XY7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga12Q91XY7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga12Q91XY7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhga12Q91XY7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga12Q91XY7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga12Q91XY7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga12Q91XY7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms