Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Gm2559-201ENSMUST00000201323 363 ntBASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga9Q91XX9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga9Q91XX9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhga9Q91XX9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.73■□□□□ 0.43
Pcdhga9Q91XX9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhga9Q91XX9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhga9Q91XX9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.73■□□□□ 0.43
Pcdhga9Q91XX9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhga9Q91XX9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga9Q91XX9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhga9Q91XX9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhga9Q91XX9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhga9Q91XX9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhga9Q91XX9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhga9Q91XX9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga9Q91XX9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms