Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb2Q91XX7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Gm43060-201ENSMUST00000200621 289 ntBASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb2Q91XX7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb2Q91XX7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb2Q91XX7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Gm13146-201ENSMUST00000118508 780 ntBASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Gm43017-201ENSMUST00000198296 752 ntBASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb2Q91XX7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Pcdhgb2Q91XX7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb2Q91XX7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb2Q91XX7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb2Q91XX7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdhgb2Q91XX7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb2Q91XX7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb2Q91XX7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhgb2Q91XX7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms