Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx41Q91VN6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx41Q91VN6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.52■□□□□ 0.88
Ddx41Q91VN6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Ddx41Q91VN6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.52■□□□□ 0.88
Ddx41Q91VN6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx41Q91VN6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx41Q91VN6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx41Q91VN6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.52■□□□□ 0.88
Ddx41Q91VN6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Ddx41Q91VN6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Gm13158-201ENSMUST00000122007 736 ntBASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.51■□□□□ 0.87
Ddx41Q91VN6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx41Q91VN6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx41Q91VN6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Ddx41Q91VN6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx41Q91VN6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx41Q91VN6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx41Q91VN6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx41Q91VN6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx41Q91VN6 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Mir6982-201ENSMUST00000184354 68 ntBASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Flg-201ENSMUST00000050758 1488 ntBASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx41Q91VN6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx41Q91VN6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx41Q91VN6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx41Q91VN6 Gm11927-201ENSMUST00000118472 759 ntBASIC20.48■□□□□ 0.87
Ddx41Q91VN6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx41Q91VN6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.48■□□□□ 0.87
Ddx41Q91VN6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx41Q91VN6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Ddx41Q91VN6 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.48■□□□□ 0.87
Ddx41Q91VN6 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.48■□□□□ 0.87
Ddx41Q91VN6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx41Q91VN6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx41Q91VN6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx41Q91VN6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Gm6576-201ENSMUST00000169678 883 ntBASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx41Q91VN6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms