Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
StrcQ8VIM6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
StrcQ8VIM6 Gm37025-201ENSMUST00000195159 829 ntBASIC21.62■■□□□ 1.05
StrcQ8VIM6 Il3ra-202ENSMUST00000223589 738 ntBASIC21.62■■□□□ 1.05
StrcQ8VIM6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
StrcQ8VIM6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
StrcQ8VIM6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.62■■□□□ 1.05
StrcQ8VIM6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
StrcQ8VIM6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
StrcQ8VIM6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
StrcQ8VIM6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
StrcQ8VIM6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
StrcQ8VIM6 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.61■■□□□ 1.05
StrcQ8VIM6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
StrcQ8VIM6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
StrcQ8VIM6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.61■■□□□ 1.05
StrcQ8VIM6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.61■■□□□ 1.05
StrcQ8VIM6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.61■■□□□ 1.05
StrcQ8VIM6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
StrcQ8VIM6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
StrcQ8VIM6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
StrcQ8VIM6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
StrcQ8VIM6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
StrcQ8VIM6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
StrcQ8VIM6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.6■■□□□ 1.05
StrcQ8VIM6 Mir770-201ENSMUST00000103252 94 ntBASIC21.6■■□□□ 1.05
StrcQ8VIM6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
StrcQ8VIM6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
StrcQ8VIM6 Gm10418-201ENSMUST00000100943 576 ntBASIC21.59■■□□□ 1.05
StrcQ8VIM6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.59■■□□□ 1.05
StrcQ8VIM6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.59■■□□□ 1.05
StrcQ8VIM6 Mir3081-201ENSMUST00000175305 84 ntBASIC21.59■■□□□ 1.05
StrcQ8VIM6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
StrcQ8VIM6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
StrcQ8VIM6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
StrcQ8VIM6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
StrcQ8VIM6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
StrcQ8VIM6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
StrcQ8VIM6 Gm11355-201ENSMUST00000121120 306 ntBASIC21.59■■□□□ 1.05
StrcQ8VIM6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
StrcQ8VIM6 Gm37722-201ENSMUST00000193757 208 ntBASIC21.59■■□□□ 1.05
StrcQ8VIM6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
StrcQ8VIM6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
StrcQ8VIM6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
StrcQ8VIM6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
StrcQ8VIM6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
StrcQ8VIM6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
StrcQ8VIM6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
StrcQ8VIM6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.58■■□□□ 1.05
StrcQ8VIM6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
StrcQ8VIM6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
StrcQ8VIM6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
StrcQ8VIM6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.04
StrcQ8VIM6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
StrcQ8VIM6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
StrcQ8VIM6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
StrcQ8VIM6 Gm25925-201ENSMUST00000158314 306 ntBASIC21.57■■□□□ 1.04
StrcQ8VIM6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.57■■□□□ 1.04
StrcQ8VIM6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.57■■□□□ 1.04
StrcQ8VIM6 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.57■■□□□ 1.04
StrcQ8VIM6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
StrcQ8VIM6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
StrcQ8VIM6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
StrcQ8VIM6 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.56■■□□□ 1.04
StrcQ8VIM6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
StrcQ8VIM6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
StrcQ8VIM6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
StrcQ8VIM6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
StrcQ8VIM6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
StrcQ8VIM6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
StrcQ8VIM6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
StrcQ8VIM6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
StrcQ8VIM6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
StrcQ8VIM6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.54■■□□□ 1.04
StrcQ8VIM6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.54■■□□□ 1.04
StrcQ8VIM6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.54■■□□□ 1.04
StrcQ8VIM6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
StrcQ8VIM6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
StrcQ8VIM6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms