Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H1fooQ8VIK3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.04■□□□□ -0
H1fooQ8VIK3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
H1fooQ8VIK3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
H1fooQ8VIK3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.04■□□□□ -0
H1fooQ8VIK3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.04■□□□□ -0
H1fooQ8VIK3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.03■□□□□ -0
H1fooQ8VIK3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H1fooQ8VIK3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
H1fooQ8VIK3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H1fooQ8VIK3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H1fooQ8VIK3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
H1fooQ8VIK3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
H1fooQ8VIK3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
H1fooQ8VIK3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H1fooQ8VIK3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
H1fooQ8VIK3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
H1fooQ8VIK3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.03■□□□□ -0
H1fooQ8VIK3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H1fooQ8VIK3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H1fooQ8VIK3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
H1fooQ8VIK3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H1fooQ8VIK3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.02■□□□□ -0
H1fooQ8VIK3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
H1fooQ8VIK3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H1fooQ8VIK3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.02■□□□□ -0
H1fooQ8VIK3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.02■□□□□ -0
H1fooQ8VIK3 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.02■□□□□ -0
H1fooQ8VIK3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H1fooQ8VIK3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.02■□□□□ -0
H1fooQ8VIK3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H1fooQ8VIK3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
H1fooQ8VIK3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
H1fooQ8VIK3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
H1fooQ8VIK3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15□□□□□ -0.01
H1fooQ8VIK3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15□□□□□ -0.01
H1fooQ8VIK3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
H1fooQ8VIK3 Gm5828-201ENSMUST00000071842 1860 ntBASIC15□□□□□ -0.01
H1fooQ8VIK3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15□□□□□ -0.01
H1fooQ8VIK3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15□□□□□ -0.01
H1fooQ8VIK3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H1fooQ8VIK3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15□□□□□ -0.01
H1fooQ8VIK3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
H1fooQ8VIK3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15□□□□□ -0.01
H1fooQ8VIK3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H1fooQ8VIK3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms