Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nkd2Q8VE28 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nkd2Q8VE28 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkd2Q8VE28 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkd2Q8VE28 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkd2Q8VE28 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Nkd2Q8VE28 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Nkd2Q8VE28 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Mir7071-201ENSMUST00000184847 69 ntBASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkd2Q8VE28 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkd2Q8VE28 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.32■□□□□ 0.2
Nkd2Q8VE28 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd2Q8VE28 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd2Q8VE28 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd2Q8VE28 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd2Q8VE28 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd2Q8VE28 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd2Q8VE28 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd2Q8VE28 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd2Q8VE28 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.3■□□□□ 0.2
Nkd2Q8VE28 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd2Q8VE28 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms