Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Mtag2-201ENSMUST00000058665 714 ntBASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndc1Q8VCB1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Mir7071-201ENSMUST00000184847 69 ntBASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Zfp783-201ENSMUST00000095946 670 ntBASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.9■□□□□ 0.3
Ndc1Q8VCB1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndc1Q8VCB1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndc1Q8VCB1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndc1Q8VCB1 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms