Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Lsm1Q8VC85 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Idnk-204ENSMUST00000226010 1898 ntBASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm1Q8VC85 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm1Q8VC85 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm1Q8VC85 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm1Q8VC85 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms