Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Gm12527-201ENSMUST00000117967 564 ntBASIC19.7■□□□□ 0.74
Rpap2Q8VC34 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpap2Q8VC34 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rpap2Q8VC34 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.67■□□□□ 0.74
Rpap2Q8VC34 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpap2Q8VC34 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpap2Q8VC34 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpap2Q8VC34 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpap2Q8VC34 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.66■□□□□ 0.74
Rpap2Q8VC34 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpap2Q8VC34 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpap2Q8VC34 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
Rpap2Q8VC34 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpap2Q8VC34 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpap2Q8VC34 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpap2Q8VC34 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Gm27275-201ENSMUST00000184318 272 ntBASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Gm10138-203ENSMUST00000206952 366 ntBASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap2Q8VC34 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpap2Q8VC34 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpap2Q8VC34 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.64■□□□□ 0.74
Rpap2Q8VC34 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpap2Q8VC34 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap2Q8VC34 Gm37856-201ENSMUST00000191634 999 ntBASIC19.64■□□□□ 0.73
Rpap2Q8VC34 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap2Q8VC34 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap2Q8VC34 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rpap2Q8VC34 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.64■□□□□ 0.73
Rpap2Q8VC34 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap2Q8VC34 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap2Q8VC34 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap2Q8VC34 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Rpap2Q8VC34 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms