Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.67□□□□□ -0.06
Nup35Q8R4R6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup35Q8R4R6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup35Q8R4R6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.65□□□□□ -0.06
Nup35Q8R4R6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup35Q8R4R6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nup35Q8R4R6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nup35Q8R4R6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms