Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nup85Q8R480 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nup85Q8R480 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.41■□□□□ 0.54
Nup85Q8R480 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.41■□□□□ 0.54
Nup85Q8R480 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nup85Q8R480 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup85Q8R480 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.4■□□□□ 0.54
Nup85Q8R480 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup85Q8R480 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nup85Q8R480 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup85Q8R480 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.4■□□□□ 0.54
Nup85Q8R480 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.4■□□□□ 0.54
Nup85Q8R480 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nup85Q8R480 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.4■□□□□ 0.54
Nup85Q8R480 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Nup85Q8R480 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup85Q8R480 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup85Q8R480 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup85Q8R480 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup85Q8R480 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Nup85Q8R480 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Nup85Q8R480 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Nup85Q8R480 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nup85Q8R480 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Nup85Q8R480 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Nup85Q8R480 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.39■□□□□ 0.53
Nup85Q8R480 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.39■□□□□ 0.53
Nup85Q8R480 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nup85Q8R480 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.39■□□□□ 0.53
Nup85Q8R480 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup85Q8R480 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.38■□□□□ 0.53
Nup85Q8R480 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nup85Q8R480 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.38■□□□□ 0.53
Nup85Q8R480 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.38■□□□□ 0.53
Nup85Q8R480 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Nup85Q8R480 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup85Q8R480 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup85Q8R480 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.37■□□□□ 0.53
Nup85Q8R480 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup85Q8R480 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup85Q8R480 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nup85Q8R480 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.37■□□□□ 0.53
Nup85Q8R480 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup85Q8R480 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup85Q8R480 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup85Q8R480 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup85Q8R480 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup85Q8R480 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup85Q8R480 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nup85Q8R480 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nup85Q8R480 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Nup85Q8R480 Gm12896-201ENSMUST00000118430 226 ntBASIC18.36■□□□□ 0.53
Nup85Q8R480 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nup85Q8R480 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.36■□□□□ 0.53
Nup85Q8R480 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup85Q8R480 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms