Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Gm38308-201ENSMUST00000194934 1809 ntBASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
Chmp7Q8R1T1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Gm38027-201ENSMUST00000192315 235 ntBASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp7Q8R1T1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp7Q8R1T1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chmp7Q8R1T1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Chmp7Q8R1T1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chmp7Q8R1T1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.94■■□□□ 1.26
Chmp7Q8R1T1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC22.94■■□□□ 1.26
Chmp7Q8R1T1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC22.94■■□□□ 1.26
Chmp7Q8R1T1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chmp7Q8R1T1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Gm42922-201ENSMUST00000195887 2078 ntBASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Gm4974-201ENSMUST00000209974 875 ntBASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Chmp7Q8R1T1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 Gm43353-201ENSMUST00000199224 1295 ntBASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp7Q8R1T1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Gm45058-201ENSMUST00000205810 766 ntBASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Chmp7Q8R1T1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms