Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alms1Q8K4E0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alms1Q8K4E0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alms1Q8K4E0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alms1Q8K4E0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alms1Q8K4E0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Alms1Q8K4E0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alms1Q8K4E0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Alms1Q8K4E0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alms1Q8K4E0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alms1Q8K4E0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alms1Q8K4E0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Alms1Q8K4E0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Alms1Q8K4E0 Gm18032-201ENSMUST00000222541 538 ntBASIC17.57■□□□□ 0.4
Alms1Q8K4E0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alms1Q8K4E0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alms1Q8K4E0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alms1Q8K4E0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alms1Q8K4E0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alms1Q8K4E0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Alms1Q8K4E0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alms1Q8K4E0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alms1Q8K4E0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alms1Q8K4E0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Alms1Q8K4E0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alms1Q8K4E0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alms1Q8K4E0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Alms1Q8K4E0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Alms1Q8K4E0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alms1Q8K4E0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alms1Q8K4E0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alms1Q8K4E0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.52■□□□□ 0.39
Alms1Q8K4E0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alms1Q8K4E0 Gm44771-201ENSMUST00000206975 626 ntBASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms