Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clrn1Q8K445 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.94■□□□□ 0.3
Clrn1Q8K445 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Clrn1Q8K445 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.93■□□□□ 0.3
Clrn1Q8K445 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Tgds-204ENSMUST00000228543 1594 ntBASIC16.93■□□□□ 0.3
Clrn1Q8K445 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn1Q8K445 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.92■□□□□ 0.3
Clrn1Q8K445 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Gm29257-201ENSMUST00000186115 639 ntBASIC16.92■□□□□ 0.3
Clrn1Q8K445 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.92■□□□□ 0.3
Clrn1Q8K445 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.92■□□□□ 0.3
Clrn1Q8K445 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn1Q8K445 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.91■□□□□ 0.3
Clrn1Q8K445 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn1Q8K445 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.9■□□□□ 0.3
Clrn1Q8K445 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Gm4968-201ENSMUST00000071458 858 ntBASIC16.9■□□□□ 0.3
Clrn1Q8K445 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn1Q8K445 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn1Q8K445 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn1Q8K445 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.89■□□□□ 0.29
Clrn1Q8K445 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn1Q8K445 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.89■□□□□ 0.29
Clrn1Q8K445 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn1Q8K445 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms