Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Gm6085-201ENSMUST00000182774 1470 ntBASIC11.25□□□□□ -0.61
Cystm1Q8K353 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC11.25□□□□□ -0.61
Cystm1Q8K353 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Gm26833-201ENSMUST00000180899 440 ntBASIC11.24□□□□□ -0.61
Cystm1Q8K353 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Gm10209-201ENSMUST00000203397 1607 ntBASIC11.24□□□□□ -0.61
Cystm1Q8K353 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cystm1Q8K353 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.23□□□□□ -0.61
Cystm1Q8K353 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Gm27045-201ENSMUST00000182145 1402 ntBASIC11.23□□□□□ -0.61
Cystm1Q8K353 Gm7856-201ENSMUST00000117514 1493 ntBASIC11.23□□□□□ -0.61
Cystm1Q8K353 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cystm1Q8K353 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Gm12251-201ENSMUST00000117893 792 ntBASIC11.22□□□□□ -0.61
Cystm1Q8K353 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC11.22□□□□□ -0.61
Cystm1Q8K353 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Cystm1Q8K353 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.22□□□□□ -0.61
Cystm1Q8K353 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cystm1Q8K353 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms