Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgcs1Q8JZK9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Hmgcs1Q8JZK9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgcs1Q8JZK9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgcs1Q8JZK9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgcs1Q8JZK9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgcs1Q8JZK9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgcs1Q8JZK9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.09■□□□□ 0.33
Hmgcs1Q8JZK9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgcs1Q8JZK9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgcs1Q8JZK9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgcs1Q8JZK9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgcs1Q8JZK9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Hmgcs1Q8JZK9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgcs1Q8JZK9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgcs1Q8JZK9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgcs1Q8JZK9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgcs1Q8JZK9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgcs1Q8JZK9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgcs1Q8JZK9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Gm26571-201ENSMUST00000181399 666 ntBASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.08■□□□□ 0.32
Hmgcs1Q8JZK9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hmgcs1Q8JZK9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms