Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfwd3Q8CIK8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd3Q8CIK8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Gm2399-201ENSMUST00000104944 225 ntBASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd3Q8CIK8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rfwd3Q8CIK8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfwd3Q8CIK8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Gm20049-201ENSMUST00000219950 730 ntBASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd3Q8CIK8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.82■□□□□ 0.28
Rfwd3Q8CIK8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Gm12527-201ENSMUST00000117967 564 ntBASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Gm2559-201ENSMUST00000201323 363 ntBASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms