Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps50Q8CI71 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps50Q8CI71 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps50Q8CI71 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps50Q8CI71 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.6■□□□□ 0.41
Vps50Q8CI71 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps50Q8CI71 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps50Q8CI71 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps50Q8CI71 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps50Q8CI71 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps50Q8CI71 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Vps50Q8CI71 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps50Q8CI71 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps50Q8CI71 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps50Q8CI71 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps50Q8CI71 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Vps50Q8CI71 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps50Q8CI71 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Vps50Q8CI71 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps50Q8CI71 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.59■□□□□ 0.41
Vps50Q8CI71 Gm6420-201ENSMUST00000193885 723 ntBASIC17.59■□□□□ 0.41
Vps50Q8CI71 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Vps50Q8CI71 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps50Q8CI71 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps50Q8CI71 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Vps50Q8CI71 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vps50Q8CI71 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps50Q8CI71 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps50Q8CI71 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vps50Q8CI71 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps50Q8CI71 Gm12441-201ENSMUST00000121806 588 ntBASIC17.58■□□□□ 0.4
Vps50Q8CI71 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps50Q8CI71 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps50Q8CI71 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps50Q8CI71 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps50Q8CI71 Fst-202ENSMUST00000223640 2612 ntBASIC17.58■□□□□ 0.4
Vps50Q8CI71 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps50Q8CI71 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps50Q8CI71 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps50Q8CI71 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.56■□□□□ 0.4
Vps50Q8CI71 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Vps50Q8CI71 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Gm5408-201ENSMUST00000197998 747 ntBASIC17.56■□□□□ 0.4
Vps50Q8CI71 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps50Q8CI71 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.56■□□□□ 0.4
Vps50Q8CI71 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.56■□□□□ 0.4
Vps50Q8CI71 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps50Q8CI71 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Nespas-201ENSMUST00000143738 1083 ntBASIC17.55■□□□□ 0.4
Vps50Q8CI71 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps50Q8CI71 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.55■□□□□ 0.4
Vps50Q8CI71 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Vps50Q8CI71 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps50Q8CI71 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps50Q8CI71 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps50Q8CI71 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps50Q8CI71 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vps50Q8CI71 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps50Q8CI71 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps50Q8CI71 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps50Q8CI71 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms