Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Rp1l1Q8CGM2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Gm24841-201ENSMUST00000158676 357 ntBASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Gm9731-201ENSMUST00000209480 747 ntBASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Gm10566-201ENSMUST00000086739 996 ntBASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rp1l1Q8CGM2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.75■□□□□ 0.59
Rp1l1Q8CGM2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rp1l1Q8CGM2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rp1l1Q8CGM2 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.75■□□□□ 0.59
Rp1l1Q8CGM2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rp1l1Q8CGM2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rp1l1Q8CGM2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rp1l1Q8CGM2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.75■□□□□ 0.59
Rp1l1Q8CGM2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rp1l1Q8CGM2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rp1l1Q8CGM2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rp1l1Q8CGM2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rp1l1Q8CGM2 Gm24589-201ENSMUST00000116692 94 ntBASIC18.74■□□□□ 0.59
Rp1l1Q8CGM2 Gm7213-201ENSMUST00000215977 950 ntBASIC18.74■□□□□ 0.59
Rp1l1Q8CGM2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rp1l1Q8CGM2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rp1l1Q8CGM2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Rp1l1Q8CGM2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Rp1l1Q8CGM2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rp1l1Q8CGM2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.74■□□□□ 0.59
Rp1l1Q8CGM2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Gm18115-201ENSMUST00000221209 621 ntBASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rp1l1Q8CGM2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rp1l1Q8CGM2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 AW822252-206ENSMUST00000208904 237 ntBASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.71■□□□□ 0.59
Rp1l1Q8CGM2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rp1l1Q8CGM2 Notumos-201ENSMUST00000151998 2659 ntBASIC18.7■□□□□ 0.58
Rp1l1Q8CGM2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rp1l1Q8CGM2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rp1l1Q8CGM2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rp1l1Q8CGM2 Gm37025-201ENSMUST00000195159 829 ntBASIC18.7■□□□□ 0.58
Rp1l1Q8CGM2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rp1l1Q8CGM2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.7■□□□□ 0.58
Rp1l1Q8CGM2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rp1l1Q8CGM2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rp1l1Q8CGM2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms