Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smc4Q8CG47 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smc4Q8CG47 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Smc4Q8CG47 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smc4Q8CG47 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smc4Q8CG47 AC108858.1-201ENSMUST00000228461 1498 ntBASIC22.11■■□□□ 1.13
Smc4Q8CG47 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Smc4Q8CG47 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smc4Q8CG47 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.11■■□□□ 1.13
Smc4Q8CG47 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Smc4Q8CG47 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smc4Q8CG47 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smc4Q8CG47 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Mir5122-201ENSMUST00000175004 89 ntBASIC22.1■■□□□ 1.13
Smc4Q8CG47 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Tgds-204ENSMUST00000228543 1594 ntBASIC22.1■■□□□ 1.13
Smc4Q8CG47 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smc4Q8CG47 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Gm11643-201ENSMUST00000119578 864 ntBASIC22.09■■□□□ 1.13
Smc4Q8CG47 Mir7071-201ENSMUST00000184847 69 ntBASIC22.09■■□□□ 1.13
Smc4Q8CG47 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smc4Q8CG47 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Smc4Q8CG47 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Smc4Q8CG47 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Smc4Q8CG47 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Smc4Q8CG47 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Smc4Q8CG47 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC22.08■■□□□ 1.13
Smc4Q8CG47 Gm43213-201ENSMUST00000151866 1790 ntBASIC22.08■■□□□ 1.13
Smc4Q8CG47 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Smc4Q8CG47 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Smc4Q8CG47 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Smc4Q8CG47 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Smc4Q8CG47 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
Smc4Q8CG47 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Smc4Q8CG47 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Smc4Q8CG47 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Smc4Q8CG47 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC22.07■■□□□ 1.12
Smc4Q8CG47 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Smc4Q8CG47 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Smc4Q8CG47 Golph3-205ENSMUST00000228671 2842 ntBASIC22.07■■□□□ 1.12
Smc4Q8CG47 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
Smc4Q8CG47 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smc4Q8CG47 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smc4Q8CG47 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.05■■□□□ 1.12
Smc4Q8CG47 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smc4Q8CG47 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.05■■□□□ 1.12
Smc4Q8CG47 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smc4Q8CG47 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smc4Q8CG47 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smc4Q8CG47 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smc4Q8CG47 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
Smc4Q8CG47 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms