Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Gm43060-201ENSMUST00000200621 289 ntBASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam228aQ8CDW1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Fam228aQ8CDW1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam228aQ8CDW1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam228aQ8CDW1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam228aQ8CDW1 Gm13146-201ENSMUST00000118508 780 ntBASIC18.83■□□□□ 0.6
Fam228aQ8CDW1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam228aQ8CDW1 Gm45417-201ENSMUST00000209533 758 ntBASIC18.83■□□□□ 0.6
Fam228aQ8CDW1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Fam228aQ8CDW1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam228aQ8CDW1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam228aQ8CDW1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.83■□□□□ 0.6
Fam228aQ8CDW1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms