Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Alx1Q8C8B0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21■□□□□ 0.95
Alx1Q8C8B0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Alx1Q8C8B0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Alx1Q8C8B0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21■□□□□ 0.95
Alx1Q8C8B0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Alx1Q8C8B0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Alx1Q8C8B0 Idnk-204ENSMUST00000226010 1898 ntBASIC21■□□□□ 0.95
Alx1Q8C8B0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Alx1Q8C8B0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Alx1Q8C8B0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Alx1Q8C8B0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Gm10418-201ENSMUST00000100943 576 ntBASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Gm10812-201ENSMUST00000099864 546 ntBASIC20.99■□□□□ 0.95
Alx1Q8C8B0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx1Q8C8B0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Alx1Q8C8B0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Alx1Q8C8B0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Alx1Q8C8B0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Alx1Q8C8B0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Alx1Q8C8B0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Alx1Q8C8B0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Alx1Q8C8B0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Alx1Q8C8B0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Alx1Q8C8B0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Gm29791-202ENSMUST00000207888 369 ntBASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Alx1Q8C8B0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.96■□□□□ 0.95
Alx1Q8C8B0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx1Q8C8B0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Mir1199-201ENSMUST00000117015 119 ntBASIC20.95■□□□□ 0.94
Alx1Q8C8B0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Alx1Q8C8B0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Gm6576-201ENSMUST00000169678 883 ntBASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Grk6-206ENSMUST00000224995 2971 ntBASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms