Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Uba3Q8C878 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Uba3Q8C878 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Uba3Q8C878 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Uba3Q8C878 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.89■□□□□ 0.61
Uba3Q8C878 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.89■□□□□ 0.61
Uba3Q8C878 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.89■□□□□ 0.61
Uba3Q8C878 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.89■□□□□ 0.61
Uba3Q8C878 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uba3Q8C878 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.88■□□□□ 0.61
Uba3Q8C878 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.88■□□□□ 0.61
Uba3Q8C878 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.88■□□□□ 0.61
Uba3Q8C878 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uba3Q8C878 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.87■□□□□ 0.61
Uba3Q8C878 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.87■□□□□ 0.61
Uba3Q8C878 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Uba3Q8C878 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uba3Q8C878 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.86■□□□□ 0.61
Uba3Q8C878 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
Uba3Q8C878 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.86■□□□□ 0.61
Uba3Q8C878 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Uba3Q8C878 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uba3Q8C878 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Uba3Q8C878 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uba3Q8C878 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uba3Q8C878 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.85■□□□□ 0.61
Uba3Q8C878 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.85■□□□□ 0.61
Uba3Q8C878 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.85■□□□□ 0.61
Uba3Q8C878 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uba3Q8C878 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uba3Q8C878 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uba3Q8C878 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Uba3Q8C878 Grk6-206ENSMUST00000224995 2971 ntBASIC18.84■□□□□ 0.61
Uba3Q8C878 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Uba3Q8C878 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Uba3Q8C878 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.84■□□□□ 0.61
Uba3Q8C878 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Uba3Q8C878 Gm20760-201ENSMUST00000179197 648 ntBASIC18.84■□□□□ 0.61
Uba3Q8C878 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.84■□□□□ 0.61
Uba3Q8C878 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms