Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Aph1bQ8C7N7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aph1bQ8C7N7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Gm10849-201ENSMUST00000100397 618 ntBASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Gm26571-201ENSMUST00000181399 666 ntBASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aph1bQ8C7N7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aph1bQ8C7N7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Gm7291-201ENSMUST00000199147 382 ntBASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Gm6365-201ENSMUST00000054711 744 ntBASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aph1bQ8C7N7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Aph1bQ8C7N7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aph1bQ8C7N7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aph1bQ8C7N7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aph1bQ8C7N7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aph1bQ8C7N7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms