Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim9Q8C7M3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim9Q8C7M3 Idnk-204ENSMUST00000226010 1898 ntBASIC19.8■□□□□ 0.76
Trim9Q8C7M3 Gm11927-201ENSMUST00000118472 759 ntBASIC19.8■□□□□ 0.76
Trim9Q8C7M3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim9Q8C7M3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.8■□□□□ 0.76
Trim9Q8C7M3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim9Q8C7M3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim9Q8C7M3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim9Q8C7M3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim9Q8C7M3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim9Q8C7M3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim9Q8C7M3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim9Q8C7M3 Dio3-201ENSMUST00000097228 1449 ntBASIC19.77■□□□□ 0.76
Trim9Q8C7M3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim9Q8C7M3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim9Q8C7M3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.77■□□□□ 0.76
Trim9Q8C7M3 Gm2559-201ENSMUST00000201323 363 ntBASIC19.77■□□□□ 0.76
Trim9Q8C7M3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim9Q8C7M3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim9Q8C7M3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim9Q8C7M3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trim9Q8C7M3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim9Q8C7M3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim9Q8C7M3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim9Q8C7M3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.75■□□□□ 0.75
Trim9Q8C7M3 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.75■□□□□ 0.75
Trim9Q8C7M3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim9Q8C7M3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim9Q8C7M3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim9Q8C7M3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim9Q8C7M3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim9Q8C7M3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trim9Q8C7M3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim9Q8C7M3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim9Q8C7M3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim9Q8C7M3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms