Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Tgds-204ENSMUST00000228543 1594 ntBASIC15.06■□□□□ 0
Smim4Q8C1Q6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Smim4Q8C1Q6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Smim4Q8C1Q6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smim4Q8C1Q6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smim4Q8C1Q6 Fst-202ENSMUST00000223640 2612 ntBASIC15.05■□□□□ 0
Smim4Q8C1Q6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Smim4Q8C1Q6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.05■□□□□ -0
Smim4Q8C1Q6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.05■□□□□ -0
Smim4Q8C1Q6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.05■□□□□ -0
Smim4Q8C1Q6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Gm22325-201ENSMUST00000158904 308 ntBASIC15.04■□□□□ -0
Smim4Q8C1Q6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Smim4Q8C1Q6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Smim4Q8C1Q6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.03■□□□□ -0
Smim4Q8C1Q6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.03■□□□□ -0
Smim4Q8C1Q6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smim4Q8C1Q6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smim4Q8C1Q6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smim4Q8C1Q6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smim4Q8C1Q6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Smim4Q8C1Q6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smim4Q8C1Q6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim4Q8C1Q6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smim4Q8C1Q6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smim4Q8C1Q6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15□□□□□ -0.01
Smim4Q8C1Q6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smim4Q8C1Q6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smim4Q8C1Q6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smim4Q8C1Q6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms