Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Cps1Q8C196 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Cps1Q8C196 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cps1Q8C196 Gm17808-201ENSMUST00000200859 894 ntBASIC24.34■■□□□ 1.49
Cps1Q8C196 Spsb2-203ENSMUST00000112473 1322 ntBASIC24.34■■□□□ 1.49
Cps1Q8C196 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC24.33■■□□□ 1.49
Cps1Q8C196 Gm37025-201ENSMUST00000195159 829 ntBASIC24.33■■□□□ 1.49
Cps1Q8C196 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Cps1Q8C196 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC24.32■■□□□ 1.48
Cps1Q8C196 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Cps1Q8C196 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cps1Q8C196 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cps1Q8C196 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cps1Q8C196 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cps1Q8C196 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Cps1Q8C196 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cps1Q8C196 BC021767-201ENSMUST00000126387 1716 ntBASIC24.32■■□□□ 1.48
Cps1Q8C196 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC24.32■■□□□ 1.48
Cps1Q8C196 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cps1Q8C196 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cps1Q8C196 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cps1Q8C196 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cps1Q8C196 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cps1Q8C196 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cps1Q8C196 Gm27357-201ENSMUST00000183754 135 ntBASIC24.3■■□□□ 1.48
Cps1Q8C196 Gm27704-201ENSMUST00000185094 107 ntBASIC24.3■■□□□ 1.48
Cps1Q8C196 Gm17807-201ENSMUST00000186869 298 ntBASIC24.3■■□□□ 1.48
Cps1Q8C196 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cps1Q8C196 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cps1Q8C196 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
Cps1Q8C196 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cps1Q8C196 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cps1Q8C196 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC24.3■■□□□ 1.48
Cps1Q8C196 Gm27389-201ENSMUST00000183622 195 ntBASIC24.3■■□□□ 1.48
Cps1Q8C196 Gm18669-201ENSMUST00000216049 778 ntBASIC24.3■■□□□ 1.48
Cps1Q8C196 AC130713.1-201ENSMUST00000228853 1096 ntBASIC24.3■■□□□ 1.48
Cps1Q8C196 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cps1Q8C196 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cps1Q8C196 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cps1Q8C196 Umpk-ps-201ENSMUST00000211897 827 ntBASIC24.29■■□□□ 1.48
Cps1Q8C196 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cps1Q8C196 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
Cps1Q8C196 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cps1Q8C196 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
Cps1Q8C196 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cps1Q8C196 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cps1Q8C196 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cps1Q8C196 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cps1Q8C196 Gm43213-201ENSMUST00000151866 1790 ntBASIC24.28■■□□□ 1.48
Cps1Q8C196 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Cps1Q8C196 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cps1Q8C196 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cps1Q8C196 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Cps1Q8C196 Gm7213-201ENSMUST00000215977 950 ntBASIC24.28■■□□□ 1.48
Cps1Q8C196 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Cps1Q8C196 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cps1Q8C196 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cps1Q8C196 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cps1Q8C196 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cps1Q8C196 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cps1Q8C196 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cps1Q8C196 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC24.27■■□□□ 1.48
Cps1Q8C196 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cps1Q8C196 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC24.27■■□□□ 1.48
Cps1Q8C196 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cps1Q8C196 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cps1Q8C196 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cps1Q8C196 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Cps1Q8C196 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cps1Q8C196 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cps1Q8C196 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cps1Q8C196 Gm18958-201ENSMUST00000174258 762 ntBASIC24.26■■□□□ 1.47
Cps1Q8C196 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC24.26■■□□□ 1.47
Cps1Q8C196 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC24.26■■□□□ 1.47
Cps1Q8C196 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cps1Q8C196 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Cps1Q8C196 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC24.26■■□□□ 1.47
Cps1Q8C196 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cps1Q8C196 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Cps1Q8C196 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cps1Q8C196 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cps1Q8C196 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cps1Q8C196 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cps1Q8C196 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cps1Q8C196 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC24.26■■□□□ 1.47
Cps1Q8C196 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms