Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Gm10653-202ENSMUST00000139570 835 ntBASIC21.29■■□□□ 1
Nek11Q8C0Q4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.29■■□□□ 1
Nek11Q8C0Q4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Nek11Q8C0Q4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nek11Q8C0Q4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Nek11Q8C0Q4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.29■■□□□ 1
Nek11Q8C0Q4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.28■■□□□ 1
Nek11Q8C0Q4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nek11Q8C0Q4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.27■■□□□ 1
Nek11Q8C0Q4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.27■■□□□ 1
Nek11Q8C0Q4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Nek11Q8C0Q4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nek11Q8C0Q4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek11Q8C0Q4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek11Q8C0Q4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nek11Q8C0Q4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek11Q8C0Q4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Nek11Q8C0Q4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek11Q8C0Q4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek11Q8C0Q4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek11Q8C0Q4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 Gm15375-201ENSMUST00000119510 849 ntBASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 Mir6349-201ENSMUST00000184059 97 ntBASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nek11Q8C0Q4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek11Q8C0Q4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Idnk-204ENSMUST00000226010 1898 ntBASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nek11Q8C0Q4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.22■□□□□ 0.99
Nek11Q8C0Q4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms