Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Flg-201ENSMUST00000050758 1488 ntBASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trub1Q8C0D0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trub1Q8C0D0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trub1Q8C0D0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Gm11927-201ENSMUST00000118472 759 ntBASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trub1Q8C0D0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Gm4968-201ENSMUST00000071458 858 ntBASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms