Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp43Q8BUM9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Dio3-201ENSMUST00000097228 1449 ntBASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp43Q8BUM9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp43Q8BUM9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp43Q8BUM9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp43Q8BUM9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp43Q8BUM9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp43Q8BUM9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.14■□□□□ 0.49
Usp43Q8BUM9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Gm12896-201ENSMUST00000118430 226 ntBASIC18.13■□□□□ 0.49
Usp43Q8BUM9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp43Q8BUM9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Idnk-204ENSMUST00000226010 1898 ntBASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Gm12441-201ENSMUST00000121806 588 ntBASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Mtag2-201ENSMUST00000058665 714 ntBASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp43Q8BUM9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms