Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Fst-202ENSMUST00000223640 2612 ntBASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr7Q8BU04 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Mir6982-201ENSMUST00000184354 68 ntBASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr7Q8BU04 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ubr7Q8BU04 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Gm37055-201ENSMUST00000191866 133 ntBASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr7Q8BU04 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.09■□□□□ 0.49
Ubr7Q8BU04 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Gm21814-202ENSMUST00000203277 873 ntBASIC18.09■□□□□ 0.49
Ubr7Q8BU04 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr7Q8BU04 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.08■□□□□ 0.49
Ubr7Q8BU04 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ubr7Q8BU04 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ubr7Q8BU04 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ubr7Q8BU04 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ubr7Q8BU04 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubr7Q8BU04 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubr7Q8BU04 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubr7Q8BU04 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubr7Q8BU04 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ubr7Q8BU04 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubr7Q8BU04 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubr7Q8BU04 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms