Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm10517-202ENSMUST00000192970 758 ntBASIC20.55■□□□□ 0.88
Scfd1Q8BRF7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scfd1Q8BRF7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scfd1Q8BRF7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scfd1Q8BRF7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.55■□□□□ 0.88
Scfd1Q8BRF7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scfd1Q8BRF7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.54■□□□□ 0.88
Scfd1Q8BRF7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scfd1Q8BRF7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scfd1Q8BRF7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.54■□□□□ 0.88
Scfd1Q8BRF7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scfd1Q8BRF7 Golph3-205ENSMUST00000228671 2842 ntBASIC20.54■□□□□ 0.88
Scfd1Q8BRF7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scfd1Q8BRF7 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.54■□□□□ 0.88
Scfd1Q8BRF7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scfd1Q8BRF7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Scfd1Q8BRF7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scfd1Q8BRF7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Scfd1Q8BRF7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Scfd1Q8BRF7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scfd1Q8BRF7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scfd1Q8BRF7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.51■□□□□ 0.87
Scfd1Q8BRF7 Gm10418-201ENSMUST00000100943 576 ntBASIC20.51■□□□□ 0.87
Scfd1Q8BRF7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scfd1Q8BRF7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Scfd1Q8BRF7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scfd1Q8BRF7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scfd1Q8BRF7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scfd1Q8BRF7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Scfd1Q8BRF7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scfd1Q8BRF7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scfd1Q8BRF7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Gm11539-201ENSMUST00000119837 557 ntBASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Gm13436-201ENSMUST00000120418 567 ntBASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Gm13559-201ENSMUST00000120476 863 ntBASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scfd1Q8BRF7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.49■□□□□ 0.87
Scfd1Q8BRF7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Gm12085-201ENSMUST00000119263 940 ntBASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms