Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4Q8BQZ5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Gm4968-201ENSMUST00000071458 858 ntBASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4Q8BQZ5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4Q8BQZ5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cpsf4Q8BQZ5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cpsf4Q8BQZ5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4Q8BQZ5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cpsf4Q8BQZ5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4Q8BQZ5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4Q8BQZ5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cpsf4Q8BQZ5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4Q8BQZ5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Cpsf4Q8BQZ5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.39■□□□□ 0.38
Cpsf4Q8BQZ5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cpsf4Q8BQZ5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4Q8BQZ5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4Q8BQZ5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4Q8BQZ5 Gm27011-201ENSMUST00000182352 972 ntBASIC17.39■□□□□ 0.37
Cpsf4Q8BQZ5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.39■□□□□ 0.37
Cpsf4Q8BQZ5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4Q8BQZ5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4Q8BQZ5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4Q8BQZ5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4Q8BQZ5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Fst-202ENSMUST00000223640 2612 ntBASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4Q8BQZ5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4Q8BQZ5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Gm12441-201ENSMUST00000121806 588 ntBASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Gm5408-201ENSMUST00000197998 747 ntBASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms