Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip4Q8BQP8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip4Q8BQP8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip4Q8BQP8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip4Q8BQP8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.85■□□□□ 0.77
Rab11fip4Q8BQP8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip4Q8BQP8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip4Q8BQP8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip4Q8BQP8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip4Q8BQP8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
Rab11fip4Q8BQP8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip4Q8BQP8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip4Q8BQP8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rab11fip4Q8BQP8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rab11fip4Q8BQP8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rab11fip4Q8BQP8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip4Q8BQP8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip4Q8BQP8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip4Q8BQP8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip4Q8BQP8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip4Q8BQP8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Rab11fip4Q8BQP8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Rab11fip4Q8BQP8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.83■□□□□ 0.76
Rab11fip4Q8BQP8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rab11fip4Q8BQP8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rab11fip4Q8BQP8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip4Q8BQP8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip4Q8BQP8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rab11fip4Q8BQP8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.8■□□□□ 0.76
Rab11fip4Q8BQP8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip4Q8BQP8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip4Q8BQP8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.8■□□□□ 0.76
Rab11fip4Q8BQP8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip4Q8BQP8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip4Q8BQP8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip4Q8BQP8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip4Q8BQP8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip4Q8BQP8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms