Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col16a1Q8BLX7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Col16a1Q8BLX7 Gm5587-201ENSMUST00000206270 674 ntBASIC23.71■■□□□ 1.39
Col16a1Q8BLX7 Gm7791-201ENSMUST00000219066 539 ntBASIC23.71■■□□□ 1.39
Col16a1Q8BLX7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col16a1Q8BLX7 Gm42922-201ENSMUST00000195887 2078 ntBASIC23.71■■□□□ 1.39
Col16a1Q8BLX7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC23.71■■□□□ 1.39
Col16a1Q8BLX7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC23.7■■□□□ 1.38
Col16a1Q8BLX7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Col16a1Q8BLX7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Col16a1Q8BLX7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC23.7■■□□□ 1.38
Col16a1Q8BLX7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col16a1Q8BLX7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col16a1Q8BLX7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col16a1Q8BLX7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
Col16a1Q8BLX7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 Gm27704-201ENSMUST00000185094 107 ntBASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col16a1Q8BLX7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC23.68■■□□□ 1.38
Col16a1Q8BLX7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col16a1Q8BLX7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Col16a1Q8BLX7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col16a1Q8BLX7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col16a1Q8BLX7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC23.68■■□□□ 1.38
Col16a1Q8BLX7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Col16a1Q8BLX7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col16a1Q8BLX7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col16a1Q8BLX7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Gm24841-201ENSMUST00000158676 357 ntBASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Gm9694-201ENSMUST00000193347 1189 ntBASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Gm21559-201ENSMUST00000220638 855 ntBASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Gm8587-201ENSMUST00000076538 843 ntBASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Gm5784-201ENSMUST00000179344 2478 ntBASIC23.67■■□□□ 1.38
Col16a1Q8BLX7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col16a1Q8BLX7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Col16a1Q8BLX7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col16a1Q8BLX7 Gm29518-201ENSMUST00000190858 372 ntBASIC23.66■■□□□ 1.38
Col16a1Q8BLX7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col16a1Q8BLX7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col16a1Q8BLX7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col16a1Q8BLX7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col16a1Q8BLX7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Col16a1Q8BLX7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col16a1Q8BLX7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Gm7461-201ENSMUST00000058918 827 ntBASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Gm29791-202ENSMUST00000207888 369 ntBASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col16a1Q8BLX7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col16a1Q8BLX7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col16a1Q8BLX7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC23.64■■□□□ 1.37
Col16a1Q8BLX7 Mir1668-201ENSMUST00000184114 107 ntBASIC23.64■■□□□ 1.37
Col16a1Q8BLX7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Col16a1Q8BLX7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col16a1Q8BLX7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Gm7638-201ENSMUST00000121348 967 ntBASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
Col16a1Q8BLX7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Gm9013-201ENSMUST00000132939 882 ntBASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Gm17807-201ENSMUST00000186869 298 ntBASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms