Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc40Q8BI79 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc40Q8BI79 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc40Q8BI79 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.67■□□□□ 0.58
Ccdc40Q8BI79 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc40Q8BI79 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc40Q8BI79 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ccdc40Q8BI79 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc40Q8BI79 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc40Q8BI79 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc40Q8BI79 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc40Q8BI79 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc40Q8BI79 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.66■□□□□ 0.58
Ccdc40Q8BI79 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc40Q8BI79 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc40Q8BI79 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc40Q8BI79 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.66■□□□□ 0.58
Ccdc40Q8BI79 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ccdc40Q8BI79 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc40Q8BI79 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc40Q8BI79 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc40Q8BI79 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc40Q8BI79 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc40Q8BI79 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc40Q8BI79 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc40Q8BI79 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc40Q8BI79 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc40Q8BI79 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc40Q8BI79 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc40Q8BI79 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc40Q8BI79 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc40Q8BI79 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ccdc40Q8BI79 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc40Q8BI79 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 Gm22325-201ENSMUST00000158904 308 ntBASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc40Q8BI79 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Gm7290-201ENSMUST00000104990 617 ntBASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Gm12918-201ENSMUST00000120234 636 ntBASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Gm15710-201ENSMUST00000121821 636 ntBASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Gm5075-201ENSMUST00000196916 622 ntBASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms