Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn3Q8BHH8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn3Q8BHH8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Gm10602-201ENSMUST00000098239 609 ntBASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Clrn3Q8BHH8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Gm13148-201ENSMUST00000118892 745 ntBASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.77■□□□□ 0.28
Clrn3Q8BHH8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clrn3Q8BHH8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clrn3Q8BHH8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clrn3Q8BHH8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clrn3Q8BHH8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn3Q8BHH8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Gm26524-201ENSMUST00000192339 390 ntBASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms