Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Gm24841-201ENSMUST00000158676 357 ntBASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 Gm17808-201ENSMUST00000200859 894 ntBASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trnp1Q80ZI1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Trnp1Q80ZI1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trnp1Q80ZI1 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trnp1Q80ZI1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trnp1Q80ZI1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnp1Q80ZI1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnp1Q80ZI1 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.28■□□□□ 0.84
Trnp1Q80ZI1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trnp1Q80ZI1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trnp1Q80ZI1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trnp1Q80ZI1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trnp1Q80ZI1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trnp1Q80ZI1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 Gm44771-201ENSMUST00000206975 626 ntBASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Trnp1Q80ZI1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trnp1Q80ZI1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trnp1Q80ZI1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trnp1Q80ZI1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Trnp1Q80ZI1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms