Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nucks1Q80XU3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Nucks1Q80XU3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nucks1Q80XU3 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.2■□□□□ 0.66
Nucks1Q80XU3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Nucks1Q80XU3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nucks1Q80XU3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nucks1Q80XU3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nucks1Q80XU3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nucks1Q80XU3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nucks1Q80XU3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nucks1Q80XU3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nucks1Q80XU3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Gm15039-201ENSMUST00000118914 875 ntBASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nucks1Q80XU3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nucks1Q80XU3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nucks1Q80XU3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Nucks1Q80XU3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.16■□□□□ 0.66
Nucks1Q80XU3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.16■□□□□ 0.66
Nucks1Q80XU3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nucks1Q80XU3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nucks1Q80XU3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Gm18284-201ENSMUST00000172604 624 ntBASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Nucks1Q80XU3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nucks1Q80XU3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nucks1Q80XU3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nucks1Q80XU3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nucks1Q80XU3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nucks1Q80XU3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nucks1Q80XU3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nucks1Q80XU3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nucks1Q80XU3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nucks1Q80XU3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.13■□□□□ 0.65
Nucks1Q80XU3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nucks1Q80XU3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms