Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrtm4Q80XG9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Lrrtm4Q80XG9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Lrrtm4Q80XG9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.45■□□□□ 0.38
Lrrtm4Q80XG9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrtm4Q80XG9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.45■□□□□ 0.38
Lrrtm4Q80XG9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.45■□□□□ 0.38
Lrrtm4Q80XG9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrtm4Q80XG9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.45■□□□□ 0.38
Lrrtm4Q80XG9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lrrtm4Q80XG9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrtm4Q80XG9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrtm4Q80XG9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrtm4Q80XG9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrtm4Q80XG9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lrrtm4Q80XG9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lrrtm4Q80XG9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrtm4Q80XG9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms