Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gm12441-201ENSMUST00000121806 588 ntBASIC18.69■□□□□ 0.58
Srrm3Q80WV7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.69■□□□□ 0.58
Srrm3Q80WV7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Srrm3Q80WV7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm3Q80WV7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm3Q80WV7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm3Q80WV7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.69■□□□□ 0.58
Srrm3Q80WV7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm3Q80WV7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Gm7860-201ENSMUST00000121190 879 ntBASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm3Q80WV7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm3Q80WV7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Haglr-201ENSMUST00000100000 2085 ntBASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Srrm3Q80WV7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm3Q80WV7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm3Q80WV7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.65■□□□□ 0.58
Srrm3Q80WV7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm3Q80WV7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm3Q80WV7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm3Q80WV7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm3Q80WV7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm3Q80WV7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Srrm3Q80WV7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm3Q80WV7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Srrm3Q80WV7 Gm20760-201ENSMUST00000179197 648 ntBASIC18.64■□□□□ 0.57
Srrm3Q80WV7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Srrm3Q80WV7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.64■□□□□ 0.57
Srrm3Q80WV7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm3Q80WV7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm3Q80WV7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm3Q80WV7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm3Q80WV7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Srrm3Q80WV7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms