Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Gm18025-201ENSMUST00000221733 862 ntBASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.62■□□□□ 0.41
Pcdh19Q80TF3 Gm715-201ENSMUST00000117865 831 ntBASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Mir7071-201ENSMUST00000184847 69 ntBASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh19Q80TF3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh19Q80TF3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Gm12382-201ENSMUST00000122005 922 ntBASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Pcdh19Q80TF3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdh19Q80TF3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh19Q80TF3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdh19Q80TF3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh19Q80TF3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Pcdh19Q80TF3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Pcdh19Q80TF3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh19Q80TF3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh19Q80TF3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh19Q80TF3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Gm43183-201ENSMUST00000200632 547 ntBASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh19Q80TF3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms