Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38bQ80SY5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38bQ80SY5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38bQ80SY5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38bQ80SY5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.68■□□□□ 0.58
Prpf38bQ80SY5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Prpf38bQ80SY5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38bQ80SY5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38bQ80SY5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Prpf38bQ80SY5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.68■□□□□ 0.58
Prpf38bQ80SY5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.68■□□□□ 0.58
Prpf38bQ80SY5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38bQ80SY5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Gm13559-201ENSMUST00000120476 863 ntBASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38bQ80SY5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Prpf38bQ80SY5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38bQ80SY5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.65■□□□□ 0.58
Prpf38bQ80SY5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38bQ80SY5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38bQ80SY5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38bQ80SY5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.65■□□□□ 0.58
Prpf38bQ80SY5 Gm33142-201ENSMUST00000193913 867 ntBASIC18.65■□□□□ 0.58
Prpf38bQ80SY5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38bQ80SY5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38bQ80SY5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf38bQ80SY5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf38bQ80SY5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Gm9103-201ENSMUST00000119371 405 ntBASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.64■□□□□ 0.57
Prpf38bQ80SY5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms