Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
ShprhQ7TPQ3 Mir1668-201ENSMUST00000184114 107 ntBASIC25.64■■□□□ 1.69
ShprhQ7TPQ3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
ShprhQ7TPQ3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
ShprhQ7TPQ3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Gm14464-201ENSMUST00000119658 1254 ntBASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
ShprhQ7TPQ3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
ShprhQ7TPQ3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ShprhQ7TPQ3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ShprhQ7TPQ3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ShprhQ7TPQ3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ShprhQ7TPQ3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ShprhQ7TPQ3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC25.61■■□□□ 1.69
ShprhQ7TPQ3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ShprhQ7TPQ3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ShprhQ7TPQ3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ShprhQ7TPQ3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ShprhQ7TPQ3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ShprhQ7TPQ3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC25.61■■□□□ 1.69
ShprhQ7TPQ3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ShprhQ7TPQ3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC25.61■■□□□ 1.69
ShprhQ7TPQ3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ShprhQ7TPQ3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
ShprhQ7TPQ3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
ShprhQ7TPQ3 Gm17661-201ENSMUST00000170317 270 ntBASIC25.6■■□□□ 1.69
ShprhQ7TPQ3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ShprhQ7TPQ3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ShprhQ7TPQ3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC25.59■■□□□ 1.69
ShprhQ7TPQ3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShprhQ7TPQ3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
ShprhQ7TPQ3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShprhQ7TPQ3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShprhQ7TPQ3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShprhQ7TPQ3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShprhQ7TPQ3 Gm5587-201ENSMUST00000206270 674 ntBASIC25.58■■□□□ 1.69
ShprhQ7TPQ3 Gm5784-201ENSMUST00000179344 2478 ntBASIC25.58■■□□□ 1.69
ShprhQ7TPQ3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC25.58■■□□□ 1.69
ShprhQ7TPQ3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ShprhQ7TPQ3 Il3ra-202ENSMUST00000223589 738 ntBASIC25.58■■□□□ 1.68
ShprhQ7TPQ3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ShprhQ7TPQ3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ShprhQ7TPQ3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ShprhQ7TPQ3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ShprhQ7TPQ3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
ShprhQ7TPQ3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Gm14859-201ENSMUST00000117752 357 ntBASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ShprhQ7TPQ3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Gm37025-201ENSMUST00000195159 829 ntBASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ShprhQ7TPQ3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
ShprhQ7TPQ3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ShprhQ7TPQ3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ShprhQ7TPQ3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC25.54■■□□□ 1.68
ShprhQ7TPQ3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC25.54■■□□□ 1.68
ShprhQ7TPQ3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
ShprhQ7TPQ3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC25.54■■□□□ 1.68
ShprhQ7TPQ3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC25.53■■□□□ 1.68
ShprhQ7TPQ3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ShprhQ7TPQ3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ShprhQ7TPQ3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ShprhQ7TPQ3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ShprhQ7TPQ3 Gm9013-201ENSMUST00000132939 882 ntBASIC25.53■■□□□ 1.68
ShprhQ7TPQ3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ShprhQ7TPQ3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
ShprhQ7TPQ3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ShprhQ7TPQ3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms